Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3752372_03517 | Not Available | Positive | 3558314 - 3558676 | 13686.3 |
| Hypothetical protein | SAMEA3752372_03518 | Not Available | Positive | 3558676 - 3558981 | 12161.5 |
| Integrase | SAMEA3752372_03519 | Not Available | Positive | 3559208 - 3560371 | 45006.4 |
| Attr | Not Available | Not Available | Positive | 3574157 - 3574168 | Not Available |
| Dmt | SAMEA3752372_04158 | Not Available | Negative | 4247827 - 4248732 | 33953.0 |
| Conserved phage protein | SAMEA3752372_04159 | Not Available | Negative | 4248725 - 4249405 | 25426.3 |
| Recombination-associated protein rdgc | SAMEA3752372_04160 | Not Available | Negative | 4249389 - 4250294 | 33829.4 |
| Base plate protein gp5 | SAMEA3752372_04161 | Not Available | Negative | 4250354 - 4251007 | 22855.1 |
| Tail length protein gp6 | SAMEA3752372_04162 | Not Available | Negative | 4251004 - 4251984 | 36832.3 |
| Baseplate protein gp24 | SAMEA3752372_04163 | Not Available | Negative | 4251988 - 4252755 | 28317.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





