Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metabolite transport protein ydfj | SAMEA3752372_04389 | Not Available | Positive | 4433783 - 4435066 | 46214.9 |
| putative sugar dehydrogenase | SAMEA3752372_04390 | Not Available | Positive | 4435156 - 4436616 | 53708.4 |
| selenium carrying protein | SAMEA3752372_04391 | Not Available | Negative | 4436652 - 4436855 | 7276.83 |
| gntr family transcriptional regulator | SAMEA3752372_04392 | Not Available | Negative | 4437032 - 4437718 | 26566.7 |
| nadp-dependent l-serine/l-allo-threonine dehydrogenase | SAMEA3752372_04393 | Not Available | Negative | 4437807 - 4438553 | 27234.5 |
| dipeptidyl carboxypeptidase ii | SAMEA3752372_04394 | Not Available | Positive | 4438690 - 4440735 | 77566.8 |
| stress response protein | SAMEA3752372_04395 | Not Available | Positive | 4441100 - 4441492 | 14121.9 |
| putative signal transduction protein | SAMEA3752372_04396 | Not Available | Positive | 4441763 - 4442653 | 33898.5 |
| major facilitator superfamily protein | SAMEA3752372_04398 | Not Available | Negative | 4443094 - 4443453 | 12599.0 |
| major facilitator superfamily protein | SAMEA3752372_04399 | Not Available | Negative | 4443476 - 4443931 | 16450.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





