Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbriae major subunit fima | SAMEA3752372_04278 | Not Available | Positive | 4339279 - 4339704 | 14056.8 |
| tyrosine recombinase | SAMEA3752372_04279 | Not Available | Negative | 4339701 - 4340297 | 23117.6 |
| tyrosine recombinase | SAMEA3752372_04280 | Not Available | Negative | 4340775 - 4341377 | 22994.8 |
| uncharacterised protein | SAMEA3752372_04281 | Not Available | Positive | 4341637 - 4342032 | 14710.0 |
| n-acetylneuraminic acid outer membrane porin | SAMEA3752372_04282 | Not Available | Positive | 4342829 - 4343545 | 27903.4 |
| n-acetylneuraminic acid mutarotase | SAMEA3752372_04283 | Not Available | Positive | 4343565 - 4344671 | 39602.2 |
| yjhs protein | SAMEA3752372_04284 | Not Available | Positive | 4344736 - 4345716 | 36859.9 |
| putative restriction endonuclease | SAMEA3752372_04285 | Not Available | Positive | 4345928 - 4346800 | 33194.7 |
| uncharacterised protein | SAMEA3752372_04286 | Not Available | Negative | 4347422 - 4349458 | 78832.2 |
| Trna-leu | Not Available | Not Available | Positive | 4350147 - 4350231 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





