Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug translocase mdfa | SAMEA3752372_04132 | Not Available | Positive | 4226716 - 4227948 | 44378.8 |
| protein | SAMEA3752372_04133 | Not Available | Negative | 4227989 - 4228267 | 9726.86 |
| putative hydrolase | SAMEA3752372_04134 | Not Available | Negative | 4228359 - 4229174 | 30295.1 |
| deor-type transcriptional regulator | SAMEA3752372_04135 | Not Available | Negative | 4229174 - 4230382 | 41913.1 |
| deor-type transcriptional regulator | SAMEA3752372_04136 | Not Available | Positive | 4230466 - 4231002 | 20307.6 |
| putative transport protein with two rck domains | SAMEA3752372_04138 | Not Available | Negative | 4231177 - 4232862 | 60355.1 |
| inner membrane protein ybjm | SAMEA3752372_04139 | Not Available | Positive | 4233132 - 4233509 | 14204.0 |
| glutaredoxin | SAMEA3752372_04140 | Not Available | Negative | 4233539 - 4233796 | 9695.39 |
| inner membrane protein | SAMEA3752372_04141 | Not Available | Positive | 4233956 - 4234114 | 5724.56 |
| ribosomal protein s6 modification protein | SAMEA3752372_04142 | Not Available | Positive | 4234111 - 4234899 | 28122.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





