Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | SAMEA3752372_04092 | Not Available | Positive | 4179567 - 4180493 | 34182.8 |
| membrane protein ybio | SAMEA3752372_04093 | Not Available | Negative | 4180490 - 4182715 | 81855.4 |
| glnq protein, subunit of glutamine abc transporter | SAMEA3752372_04094 | Not Available | Negative | 4182832 - 4183554 | 26733.6 |
| glutamine transport system permease | SAMEA3752372_04095 | Not Available | Negative | 4183551 - 4184210 | 24423.9 |
| glutamine abc transporter, substrate-binding protein | SAMEA3752372_04096 | Not Available | Negative | 4184349 - 4185095 | 27205.6 |
| dna starvation/stationary phase protection protein dps | SAMEA3752372_04097 | Not Available | Negative | 4185499 - 4186002 | 18696.3 |
| threonine and homoserine efflux system | SAMEA3752372_04098 | Not Available | Negative | 4186301 - 4187188 | 31170.4 |
| outer membrane protein x | SAMEA3752372_04099 | Not Available | Positive | 4187541 - 4188056 | 18603.6 |
| membrane protein ybip | SAMEA3752372_04100 | Not Available | Negative | 4188105 - 4189688 | 59731.4 |
| mn(2)-response protein, mntr-repressed | SAMEA3752372_04101 | Not Available | Negative | 4189960 - 4190088 | 5031.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





