Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-2 subunit | SAMEA3752372_03830 | Not Available | Positive | 3904021 - 3905007 | 36005.9 |
| ni/fe-hydrogenase 2 b-type cytochrome subunit | SAMEA3752372_03831 | Not Available | Positive | 3904997 - 3906175 | 43634.7 |
| hydrogenase-2 large subunit | SAMEA3752372_03832 | Not Available | Positive | 3906172 - 3907875 | 62494.6 |
| hydrogenase 2 maturation protease | SAMEA3752372_03833 | Not Available | Positive | 3907875 - 3908369 | 17712.8 |
| hydrogenase-2 component protein | SAMEA3752372_03834 | Not Available | Positive | 3908362 - 3908850 | 17964.7 |
| hydrogenase nickel incorporation protein hybf | SAMEA3752372_03835 | Not Available | Positive | 3908843 - 3909184 | 12698.1 |
| hydrogenase-2 component protein | SAMEA3752372_03836 | Not Available | Positive | 3909197 - 3909445 | 8808.67 |
| glutathione s-transferase | SAMEA3752372_03837 | Not Available | Negative | 3909568 - 3910434 | 32375.3 |
| bifunctional glutathionylspermidine synthetase/amidase | SAMEA3752372_03838 | Not Available | Positive | 3910639 - 3912498 | 70536.7 |
| low-affinity inorganic phosphate transporter 2 | SAMEA3752372_03839 | Not Available | Positive | 3912790 - 3914289 | 53826.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





