Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase-oxidase | SAMEA3752372_03809 | Not Available | Negative | 3884303 - 3885046 | 26894.0 |
| putative oligopeptide transporter | SAMEA3752372_03810 | Not Available | Positive | 3885317 - 3886798 | 54102.0 |
| deoxyribodipyrimidine photolyase, fad-binding | SAMEA3752372_03811 | Not Available | Negative | 3886840 - 3888258 | 53710.8 |
| photoreactivation-associated protein | SAMEA3752372_03812 | Not Available | Negative | 3888255 - 3888764 | 20286.4 |
| endoribonuclease syme | SAMEA3752372_03813 | Not Available | Positive | 3888893 - 3889186 | 10893.2 |
| uncharacterised protein | SAMEA3752372_03814 | Not Available | Negative | 3889254 - 3889694 | 16656.4 |
| rhs repeat family protein | SAMEA3752372_03815 | Not Available | Negative | 3889697 - 3890386 | 26082.4 |
| 2,5-diketo-d-gluconic acid reductase a | SAMEA3752372_03817 | Not Available | Negative | 3891941 - 3892768 | 31111.4 |
| putative alcohol dehydrogenase | SAMEA3752372_03818 | Not Available | Negative | 3892873 - 3894036 | 42113.5 |
| transcriptional regulator yqhc | SAMEA3752372_03819 | Not Available | Positive | 3894173 - 3895129 | 36030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





