Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transporter | SAMEA3752372_03718 | Not Available | Positive | 3791342 - 3793174 | 65905.9 |
| 5'-nucleotidase | SAMEA3752372_03719 | Not Available | Negative | 3793311 - 3793910 | 22667.2 |
| putative aminotransferase | SAMEA3752372_03720 | Not Available | Negative | 3793994 - 3795211 | 45519.9 |
| nadh dehydrogenase operon transcriptional regulator | SAMEA3752372_03721 | Not Available | Positive | 3796131 - 3797069 | 34611.8 |
| uncharacterised protein | SAMEA3752372_03722 | Not Available | Negative | 3797272 - 3797436 | 6476.09 |
| nadh-quinone oxidoreductase subunit a | SAMEA3752372_03723 | Not Available | Positive | 3797699 - 3798142 | 16458.2 |
| nadh dehydrogenase i subunit b | SAMEA3752372_03724 | Not Available | Positive | 3798158 - 3798820 | 25057.3 |
| nadh-quinone oxidoreductase subunit c/d | SAMEA3752372_03725 | Not Available | Positive | 3798914 - 3800716 | 68728.5 |
| nadh-quinone oxidoreductase subunit e | SAMEA3752372_03726 | Not Available | Positive | 3800719 - 3801219 | 18591.1 |
| nadh dehydrogenase i subunit f | SAMEA3752372_03727 | Not Available | Positive | 3801216 - 3802553 | 49295.2 |
Pathways
840 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





