Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glutathione s-transferase | SAMEA3752372_03708 | Not Available | Negative | 3781426 - 3782073 | 24412.1 |
| putative glutathione s-transferase | SAMEA3752372_03709 | Not Available | Positive | 3782209 - 3782853 | 24298.9 |
| putative phosphodiesterase | SAMEA3752372_03710 | Not Available | Positive | 3782909 - 3783460 | 20015.1 |
| nudix hydrolase | SAMEA3752372_03711 | Not Available | Positive | 3783518 - 3784060 | 20376.9 |
| putative c4-dicarboxylate anaerobic transporter | SAMEA3752372_03712 | Not Available | Negative | 3784093 - 3785613 | 54800.0 |
| phosphate acetyltransferase | SAMEA3752372_03713 | Not Available | Negative | 3785803 - 3787947 | 77162.5 |
| acetate/propionate kinase | SAMEA3752372_03714 | Not Available | Negative | 3788022 - 3789224 | 43293.0 |
| inner membrane protein | SAMEA3752372_03715 | Not Available | Positive | 3789562 - 3790017 | 17214.1 |
| yfbu family protein | SAMEA3752372_03716 | Not Available | Positive | 3790100 - 3790594 | 19537.4 |
| putative phosphatase/phosphohexomutase | SAMEA3752372_03717 | Not Available | Positive | 3790605 - 3791255 | 23012.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





