Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3752372_02217 | Not Available | Negative | 2190167 - 2190940 | 29072.6 |
| predicted lipase | SAMEA3752372_02218 | Not Available | Negative | 2191349 - 2192365 | 38125.6 |
| Lysr family transcriptional regulator | SAMEA3752372_02219 | Not Available | Negative | 2193735 - 2194619 | 33374.4 |
| Putative atp-dependent protease | SAMEA3752372_02869 | Not Available | Positive | 2899169 - 2899348 | 6222.72 |
| Attl | Not Available | Not Available | Positive | 2899468 - 2899488 | Not Available |
| Integrase | SAMEA3752372_02870 | Not Available | Positive | 2899515 - 2900744 | 47078.2 |
| putative prophage protein | SAMEA3752372_02871 | Not Available | Positive | 2901362 - 2902480 | 41505.1 |
| putative prophage protein | SAMEA3752372_02872 | Not Available | Positive | 2902473 - 2902682 | 7778.41 |
| Hypothetical protein | SAMEA3752372_02873 | Not Available | Positive | 2902675 - 2902887 | 7827.49 |
| uncharacterised protein | SAMEA3752372_02874 | Not Available | Positive | 2902877 - 2903095 | 8299.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





