Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fimbrial adhesin | SAMEA3752372_03678 | Not Available | Positive | 3752682 - 3753545 | 31819.0 |
| smr protein/muts2 | SAMEA3752372_03679 | Not Available | Negative | 3753615 - 3754166 | 21000.5 |
| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3752372_03680 | Not Available | Positive | 3754332 - 3755264 | 35031.7 |
| chorismate synthase | SAMEA3752372_03681 | Not Available | Positive | 3755299 - 3756384 | 39165.9 |
| penicillin-insensitive murein endopeptidase | SAMEA3752372_03682 | Not Available | Positive | 3756388 - 3757212 | 30140.4 |
| inner membrane protein | SAMEA3752372_03683 | Not Available | Positive | 3757212 - 3758021 | 28645.2 |
| putative transporting atpase | SAMEA3752372_03684 | Not Available | Positive | 3758021 - 3758569 | 21159.6 |
| protein | SAMEA3752372_03685 | Not Available | Positive | 3758603 - 3758881 | 10000.6 |
| trna u-34 5-methylaminomethyl-2-thiouridine biosynthesis protein mnmc | SAMEA3752372_03686 | Not Available | Negative | 3758937 - 3760943 | 74563.4 |
| 3-oxoacyl-acp synthase | SAMEA3752372_03687 | Not Available | Positive | 3761102 - 3762322 | 42615.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





