Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid oxidation comple beta subunit (3 -ketoacyl-coa thiolase) | SAMEA3752372_03668 | Not Available | Positive | 3742293 - 3743603 | 46533.3 |
| fatty acid oxidation complex alpha subunit | SAMEA3752372_03669 | Not Available | Positive | 3743603 - 3745747 | 77141.0 |
| phosphohistidine phosphatase | SAMEA3752372_03670 | Not Available | Positive | 3745950 - 3746435 | 17208.8 |
| fimbrial protein | SAMEA3752372_03671 | Not Available | Positive | 3747097 - 3747663 | 19886.5 |
| fimbrial outer membrane usher protein | SAMEA3752372_03672 | Not Available | Positive | 3747747 - 3749909 | 79634.2 |
| fimbrial outer membrane usher protein | SAMEA3752372_03673 | Not Available | Positive | 3749931 - 3750386 | 16303.3 |
| fimbrial chaperone protein | SAMEA3752372_03674 | Not Available | Positive | 3750406 - 3751155 | 27738.4 |
| fimbrial protein | SAMEA3752372_03675 | Not Available | Positive | 3751171 - 3751662 | 17201.7 |
| fimbrial protein | SAMEA3752372_03676 | Not Available | Positive | 3751659 - 3752138 | 17327.4 |
| fimbrial protein | SAMEA3752372_03677 | Not Available | Positive | 3752135 - 3752680 | 19439.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





