Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative short chain dehydrogenase | SAMEA3752372_03647 | Not Available | Positive | 3720156 - 3720941 | 28115.7 |
| putative fad-binding oxidoreductase | SAMEA3752372_03648 | Not Available | Positive | 3721011 - 3722465 | 53772.5 |
| major facilitator superfamily protein | SAMEA3752372_03649 | Not Available | Positive | 3722558 - 3723895 | 48151.9 |
| electron transfer flavoprotein subunit ygcr | SAMEA3752372_03650 | Not Available | Positive | 3723873 - 3724652 | 28695.7 |
| electron transfer flavoprotein subunit ygcq | SAMEA3752372_03651 | Not Available | Positive | 3724649 - 3725509 | 30340.4 |
| glycerol antiterminator regulatory protein | SAMEA3752372_03652 | Not Available | Negative | 3725656 - 3726231 | 20787.6 |
| ferredoxin-like protein ygco | SAMEA3752372_03653 | Not Available | Negative | 3726248 - 3726508 | 9646.53 |
| putative fad-dependent oxidoreductase | SAMEA3752372_03654 | Not Available | Negative | 3726499 - 3727770 | 46256.7 |
| 6-pyruvoyl tetrahydrobiopterin synthase | SAMEA3752372_03655 | Not Available | Negative | 3727848 - 3728213 | 13799.7 |
| sulfite reductase (nadph) flavoprotein alpha subunit | SAMEA3752372_03656 | Not Available | Positive | 3728529 - 3730328 | 66299.4 |
Pathways
1135 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





