Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adhesin/invasin-like protein | SAMEA3752372_03564 | Not Available | Positive | 3604880 - 3605896 | 36118.6 |
| putative lipoprotein | SAMEA3752372_03565 | Not Available | Positive | 3605950 - 3606372 | 15245.2 |
| uncharacterised protein | SAMEA3752372_03566 | Not Available | Positive | 3606369 - 3606572 | 7500.42 |
| dna-binding transcriptional regulator cuer | SAMEA3752372_03567 | Not Available | Negative | 3606576 - 3606983 | 15236.0 |
| type i secretion system protein | SAMEA3752372_03568 | Not Available | Negative | 3606980 - 3608155 | 43666.5 |
| type i secretion system, atp-binding protein | SAMEA3752372_03569 | Not Available | Negative | 3608152 - 3610314 | 80721.7 |
| adhesin for cattle intestine colonization | SAMEA3752372_03570 | Not Available | Negative | 3610318 - 3628206 | 592307.0 |
| adhesin for cattle intestine colonization | SAMEA3752372_03571 | Not Available | Negative | 3628308 - 3631118 | 94089.5 |
| putative type i secretion protein | SAMEA3752372_03572 | Not Available | Negative | 3631227 - 3632582 | 49295.9 |
| putative amino acid permease | SAMEA3752372_03573 | Not Available | Negative | 3632920 - 3634212 | 45659.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





