Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | SAMEA3752372_03523 | Not Available | Negative | 3561867 - 3562874 | 36579.0 |
| fimbrial outer membrane usher protein | SAMEA3752372_03524 | Not Available | Negative | 3562887 - 3565496 | 95976.5 |
| fimbrial chaperone | SAMEA3752372_03525 | Not Available | Negative | 3565527 - 3566219 | 25503.2 |
| fimbrial-like protein | SAMEA3752372_03526 | Not Available | Negative | 3566438 - 3566980 | 18475.5 |
| 5,10-methylene-tetrahydrofolate dehydrogenase | SAMEA3752372_03527 | Not Available | Positive | 3567451 - 3568317 | 30987.6 |
| putative rna-binding protein | SAMEA3752372_03528 | Not Available | Positive | 3568319 - 3568531 | 7389.95 |
| putative membrane-bound metal-dependent hydrolase | SAMEA3752372_03529 | Not Available | Positive | 3568639 - 3569160 | 19422.4 |
| cysteinyl-trna synthetase | SAMEA3752372_03530 | Not Available | Negative | 3569196 - 3570581 | 52213.0 |
| peptidyl-prolyl cis-trans isomerase b | SAMEA3752372_03531 | Not Available | Positive | 3570755 - 3571249 | 18184.5 |
| udp-2,3-diacylglucosamine hydrolase | SAMEA3752372_03532 | Not Available | Positive | 3571252 - 3571974 | 26867.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





