Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter substrate-binding protein | SAMEA3752372_03496 | Not Available | Negative | 3539394 - 3540434 | 37051.9 |
| putative fimbrial adhesin | SAMEA3752372_03497 | Not Available | Negative | 3540682 - 3541752 | 38504.3 |
| fimbrial outer membrane usher protein | SAMEA3752372_03498 | Not Available | Negative | 3541763 - 3544285 | 92664.5 |
| fimbrial chaperone protein | SAMEA3752372_03499 | Not Available | Negative | 3544310 - 3545041 | 27207.4 |
| putative major fimbrial subunit | SAMEA3752372_03500 | Not Available | Negative | 3545089 - 3545661 | 19728.1 |
| glucosamine--fructose-6-phosphate aminotransferase | SAMEA3752372_03501 | Not Available | Negative | 3545968 - 3547797 | 66870.3 |
| bifunctional protein glmu | SAMEA3752372_03502 | Not Available | Negative | 3547959 - 3549329 | 49207.1 |
| Trna-arg | Not Available | Not Available | Positive | 3560387 - 3560463 | Not Available |
| two component transcriptional regulator, luxr family | SAMEA3752372_03521 | Not Available | Positive | 3560706 - 3561338 | 23691.9 |
| fimbrial protein | SAMEA3752372_03522 | Not Available | Negative | 3561341 - 3561856 | 18153.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





