Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactonate operon transcriptional repressor | SAMEA3752372_03466 | Not Available | Negative | 3502978 - 3503667 | 26081.1 |
| putative lipoprotein | SAMEA3752372_03467 | Not Available | Positive | 3503944 - 3504600 | 24131.9 |
| putative phosphatase | SAMEA3752372_03468 | Not Available | Negative | 3504644 - 3505456 | 29722.8 |
| radical sam domain-containing protein | SAMEA3752372_03469 | Not Available | Negative | 3505571 - 3505969 | 13787.4 |
| dna gyrase subunit b | SAMEA3752372_03470 | Not Available | Negative | 3506209 - 3508623 | 89955.0 |
| dna replication and repair protein | SAMEA3752372_03471 | Not Available | Negative | 3508652 - 3509725 | 40516.4 |
| dna polymerase iii | SAMEA3752372_03472 | Not Available | Negative | 3509725 - 3510825 | 40589.1 |
| chromosomal replication initiation protein | SAMEA3752372_03473 | Not Available | Negative | 3510830 - 3512233 | 52553.7 |
| 50s ribosomal protein l34 | SAMEA3752372_03474 | Not Available | Positive | 3512840 - 3512980 | 5380.74 |
| ribonuclease p protein component | SAMEA3752372_03475 | Not Available | Positive | 3513030 - 3513356 | 12466.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





