Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transport protein yide | SAMEA3752372_03455 | Not Available | Negative | 3493118 - 3494779 | 58940.9 |
| small heat shock protein b | SAMEA3752372_03456 | Not Available | Negative | 3494975 - 3495403 | 16094.1 |
| putative lipoprotein | SAMEA3752372_03458 | Not Available | Positive | 3496306 - 3496566 | 9326.99 |
| putative atp/gtp-binding protein | SAMEA3752372_03459 | Not Available | Negative | 3496568 - 3497782 | 44937.5 |
| oxidoreductase | SAMEA3752372_03460 | Not Available | Positive | 3497883 - 3498536 | 24578.4 |
| oxidoreductase | SAMEA3752372_03461 | Not Available | Positive | 3498541 - 3498948 | 15176.6 |
| d-galactonate transporter | SAMEA3752372_03462 | Not Available | Negative | 3498945 - 3500237 | 47079.4 |
| galactonate dehydratase | SAMEA3752372_03463 | Not Available | Negative | 3500357 - 3501505 | 42525.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | SAMEA3752372_03464 | Not Available | Negative | 3501502 - 3502119 | 21396.8 |
| 2-dehydro-3-deoxygalactonokinase | SAMEA3752372_03465 | Not Available | Negative | 3502103 - 3502981 | 31400.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





