Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMEA3752372_03434 | Not Available | Negative | 3471969 - 3473288 | 48277.3 |
| sensory histidine kinase uhpb | SAMEA3752372_03435 | Not Available | Negative | 3473298 - 3474200 | 33325.3 |
| sensory histidine kinase uhpb | SAMEA3752372_03436 | Not Available | Negative | 3474207 - 3474800 | 22625.5 |
| two-component system response regulator | SAMEA3752372_03437 | Not Available | Negative | 3474800 - 3475390 | 20890.6 |
| uncharacterised protein | SAMEA3752372_03438 | Not Available | Negative | 3475552 - 3476979 | 53353.4 |
| uncharacterised protein | SAMEA3752372_03439 | Not Available | Negative | 3477233 - 3478528 | 48164.5 |
| acetolactate synthase isozyme i small subunit | SAMEA3752372_03440 | Not Available | Negative | 3478793 - 3479083 | 11106.4 |
| acetolactate synthase isozyme i large subunit | SAMEA3752372_03441 | Not Available | Negative | 3479087 - 3480775 | 60389.1 |
| toxic peptide tisb | SAMEA3752372_03443 | Not Available | Positive | 3481544 - 3481633 | 3195.29 |
| multidrug resistance protein d | SAMEA3752372_03444 | Not Available | Positive | 3481913 - 3483097 | 42258.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





