Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SAMEA3752372_03424 | Not Available | Positive | 3453775 - 3454455 | 25511.4 |
| putative invasin | SAMEA3752372_03425 | Not Available | Negative | 3454507 - 3456810 | 82314.5 |
| putative invasin | SAMEA3752372_03426 | Not Available | Negative | 3456820 - 3464100 | 250877.0 |
| ribonucleoside transporter | SAMEA3752372_03427 | Not Available | Negative | 3464302 - 3465618 | 46441.1 |
| uncharacterized protein conserved in bacteria | SAMEA3752372_03428 | Not Available | Positive | 3465713 - 3466072 | 13739.6 |
| putative regulatory protein | SAMEA3752372_03429 | Not Available | Positive | 3466056 - 3466379 | 11639.2 |
| protein of uncharacterised function (duf1198) | SAMEA3752372_03430 | Not Available | Negative | 3466495 - 3466947 | 17220.1 |
| putative permease | SAMEA3752372_03431 | Not Available | Negative | 3467000 - 3468334 | 46952.5 |
| adenine deaminase | SAMEA3752372_03432 | Not Available | Positive | 3468509 - 3470275 | 63815.2 |
| hexosephosphate transport protein | SAMEA3752372_03433 | Not Available | Negative | 3470322 - 3471713 | 50609.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





