Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease la | SAMEA3752372_03404 | Not Available | Negative | 3435685 - 3437445 | 65736.3 |
| putative dehydrogenase | SAMEA3752372_03405 | Not Available | Positive | 3437631 - 3438083 | 17694.4 |
| outer membrane protein a | SAMEA3752372_03406 | Not Available | Negative | 3438159 - 3439199 | 37175.7 |
| sos cell division inhibitor | SAMEA3752372_03407 | Not Available | Negative | 3439555 - 3440064 | 18802.5 |
| putative dna transformation protein with tfox domain | SAMEA3752372_03408 | Not Available | Positive | 3440283 - 3440912 | 24148.3 |
| membrane protein yccs | SAMEA3752372_03409 | Not Available | Negative | 3440875 - 3443037 | 82064.8 |
| putative inner membrane protein yccf | SAMEA3752372_03410 | Not Available | Negative | 3443047 - 3443493 | 16276.3 |
| dna helicase iv | SAMEA3752372_03411 | Not Available | Positive | 3443616 - 3445670 | 77975.5 |
| methylglyoxal synthase | SAMEA3752372_03412 | Not Available | Negative | 3445702 - 3446160 | 16919.6 |
| uncharacterized protein conserved in bacteria (duf2057) | SAMEA3752372_03413 | Not Available | Negative | 3446257 - 3446919 | 24595.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





