Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate dehydrogenase 2 | SAMEA3752372_03394 | Not Available | Positive | 3423914 - 3424924 | 36791.7 |
| protein | SAMEA3752372_03395 | Not Available | Positive | 3425098 - 3425640 | 20589.9 |
| putative 2fe-2s iron-sulfur cluster binding protein | SAMEA3752372_03396 | Not Available | Negative | 3425637 - 3426746 | 40723.7 |
| putative rna methylase | SAMEA3752372_03397 | Not Available | Positive | 3426990 - 3429098 | 78900.6 |
| abc transporter atp-binding protein | SAMEA3752372_03398 | Not Available | Positive | 3429110 - 3431017 | 72124.2 |
| paraquat-inducible protein a | SAMEA3752372_03399 | Not Available | Positive | 3431147 - 3432400 | 46447.2 |
| paraquat-inducible protein b | SAMEA3752372_03400 | Not Available | Positive | 3432405 - 3434045 | 60497.0 |
| putative lipoprotein | SAMEA3752372_03401 | Not Available | Positive | 3434042 - 3434605 | 20635.5 |
| ribosome modulation factor | SAMEA3752372_03402 | Not Available | Positive | 3434861 - 3435028 | 6507.88 |
| 3-hydroxydecanoyl-acp dehydratase | SAMEA3752372_03403 | Not Available | Negative | 3435098 - 3435724 | 23066.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





