Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein f | SAMEA3752372_03384 | Not Available | Negative | 3412443 - 3413147 | 25093.9 |
| asparaginyl-trna synthetase | SAMEA3752372_03385 | Not Available | Negative | 3413750 - 3415150 | 52573.2 |
| nicotinate phosphoribosyltransferase | SAMEA3752372_03386 | Not Available | Negative | 3415320 - 3416522 | 45885.7 |
| aminopeptidase n | SAMEA3752372_03387 | Not Available | Positive | 3416788 - 3419400 | 98932.0 |
| putative aliphatic sulfonates abc transporter, atp-binding protein | SAMEA3752372_03388 | Not Available | Negative | 3419442 - 3420209 | 27724.9 |
| putative aliphatic sulfonates abc transporter permease | SAMEA3752372_03389 | Not Available | Negative | 3420206 - 3420757 | 20302.6 |
| putative aliphatic sulfonates abc transporter permease | SAMEA3752372_03390 | Not Available | Negative | 3420797 - 3420997 | 7274.94 |
| alkanesulfonate monooxygenase | SAMEA3752372_03391 | Not Available | Negative | 3421008 - 3422153 | 41674.5 |
| alkanesulfonate transporter substrate-binding subunit | SAMEA3752372_03392 | Not Available | Negative | 3422150 - 3423109 | 34623.8 |
| fmn reductase (sulfate starvation-induced protein | SAMEA3752372_03393 | Not Available | Negative | 3423102 - 3423677 | 21240.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





