Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | SAMEA3752372_03364 | Not Available | Positive | 3387538 - 3388221 | 24747.8 |
| 30s ribosomal protein s1 | SAMEA3752372_03365 | Not Available | Positive | 3388332 - 3390005 | 61161.5 |
| integration host factor | SAMEA3752372_03366 | Not Available | Positive | 3390165 - 3390449 | 10651.8 |
| putative competence-related protein | SAMEA3752372_03367 | Not Available | Positive | 3390656 - 3392920 | 84578.0 |
| lipid a export permease msba | SAMEA3752372_03368 | Not Available | Positive | 3392957 - 3394705 | 64491.7 |
| tetraacyldisaccharide 4'-kinase (lipid a 4'-kinase) | SAMEA3752372_03369 | Not Available | Positive | 3394702 - 3395688 | 35624.5 |
| putative cytoplasmic protein | SAMEA3752372_03370 | Not Available | Positive | 3395725 - 3396957 | 47689.7 |
| peroxide and acid resistance protein, upf0434 family | SAMEA3752372_03371 | Not Available | Positive | 3397009 - 3397191 | 6855.35 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | SAMEA3752372_03372 | Not Available | Positive | 3397188 - 3397934 | 27628.2 |
| uncharacterised protein | SAMEA3752372_03373 | Not Available | Positive | 3398088 - 3398981 | 34489.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





