Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMEA3752372_03354 | Not Available | Positive | 3373678 - 3374826 | 41462.2 |
| putative amino acid permease | SAMEA3752372_03355 | Not Available | Positive | 3375036 - 3376466 | 52469.5 |
| pyruvate formate lyase-activating enzyme 1 | SAMEA3752372_03356 | Not Available | Negative | 3376676 - 3377416 | 28205.9 |
| formate acetyltransferase 1 | SAMEA3752372_03357 | Not Available | Negative | 3377608 - 3379890 | 85305.0 |
| formate transporter | SAMEA3752372_03358 | Not Available | Negative | 3379945 - 3381141 | 44139.9 |
| putative fatty acid binding protein | SAMEA3752372_03359 | Not Available | Negative | 3381208 - 3382968 | 65610.9 |
| membrane protein ycap | SAMEA3752372_03360 | Not Available | Positive | 3383098 - 3383790 | 26269.4 |
| phosphoserine aminotransferase | SAMEA3752372_03361 | Not Available | Positive | 3383989 - 3385077 | 39826.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMEA3752372_03362 | Not Available | Positive | 3385148 - 3386431 | 46166.6 |
| peptidase, m48b family | SAMEA3752372_03363 | Not Available | Positive | 3386601 - 3387365 | 26778.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





