Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane phosphoporin protein e | SAMEA3752372_03318 | Not Available | Negative | 3340201 - 3340953 | 27925.1 |
| outer membrane phosphoporin protein e | SAMEA3752372_03319 | Not Available | Negative | 3341017 - 3341256 | 8756.35 |
| gamma-glutamyl kinase | SAMEA3752372_03320 | Not Available | Positive | 3341544 - 3342647 | 39058.9 |
| gamma-glutamyl phosphate reductase | SAMEA3752372_03321 | Not Available | Positive | 3342659 - 3343912 | 44632.7 |
| Trna-thr | Not Available | Not Available | Positive | 3344027 - 3344102 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 3353705 - 3353792 | Not Available |
| translation initiation factor if-1 | SAMEA3752372_03339 | Not Available | Negative | 3354046 - 3354264 | 8250.1 |
| leucyl/phenylalanyl-trna-protein transferase | SAMEA3752372_03340 | Not Available | Negative | 3354549 - 3355253 | 26620.0 |
| abc transporter atp-binding protein/permease | SAMEA3752372_03341 | Not Available | Negative | 3355295 - 3357016 | 62918.1 |
| abc transporter atp-binding protein/permease | SAMEA3752372_03342 | Not Available | Negative | 3357017 - 3358783 | 65068.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





