Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | SAMEA3752372_03308 | Not Available | Positive | 3333072 - 3334127 | 39488.1 |
| antitoxin of the yafo-yafn toxin-antitoxin system | SAMEA3752372_03309 | Not Available | Positive | 3334179 - 3334472 | 11236.4 |
| toxin yafo | SAMEA3752372_03310 | Not Available | Positive | 3334475 - 3334873 | 15429.7 |
| putative acetyltransferase | SAMEA3752372_03311 | Not Available | Positive | 3334961 - 3335335 | 14427.3 |
| ykfj | SAMEA3752372_03312 | Not Available | Positive | 3335580 - 3335834 | 9162.09 |
| peptide chain release factor-like protein | SAMEA3752372_03313 | Not Available | Positive | 3335877 - 3336134 | 9831.92 |
| aminoacyl-histidine dipeptidase | SAMEA3752372_03314 | Not Available | Negative | 3336191 - 3337648 | 52950.5 |
| xanthine-guanine phosphoribosyltransferase | SAMEA3752372_03315 | Not Available | Positive | 3337909 - 3338367 | 16971.6 |
| esterase | SAMEA3752372_03316 | Not Available | Positive | 3338459 - 3339703 | 47025.4 |
| sigma factor-binding protein crl (curlin genes transcriptional activator) | SAMEA3752372_03317 | Not Available | Positive | 3339761 - 3340162 | 15614.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





