Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook capping protein | SAMEA3752372_03288 | Not Available | Positive | 3314832 - 3315545 | 24631.2 |
| lateral flagellar hook protein (flge-like) | SAMEA3752372_03289 | Not Available | Positive | 3315689 - 3316891 | 41888.7 |
| lateral flagellar rod protein (flgf-like) | SAMEA3752372_03290 | Not Available | Positive | 3316891 - 3317628 | 25895.4 |
| flagellar basal body rod protein flgg | SAMEA3752372_03291 | Not Available | Positive | 3317706 - 3318491 | 27507.3 |
| flagellar l-ring protein | SAMEA3752372_03292 | Not Available | Positive | 3318697 - 3319362 | 24085.2 |
| lateral flagellar p-ring protein (flgi-like) | SAMEA3752372_03293 | Not Available | Positive | 3319377 - 3320477 | 37673.9 |
| lateral flagellar peptidoglycan hydrolase (flgj-like) | SAMEA3752372_03294 | Not Available | Positive | 3320477 - 3320776 | 10954.2 |
| lateral flagellar hook associated protein 1 (flgk-like) | SAMEA3752372_03295 | Not Available | Positive | 3320982 - 3322358 | 48332.0 |
| lateral flagellar hook associated protein 3 (flgl-like) | SAMEA3752372_03296 | Not Available | Positive | 3322373 - 3323302 | 32984.5 |
| lateral flagellar putative hook associated protein | SAMEA3752372_03297 | Not Available | Positive | 3323319 - 3324296 | 35244.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





