Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glysosyltransferase | SAMEA3752372_03278 | Not Available | Negative | 3305742 - 3308213 | 94101.8 |
| uncharacterised protein | SAMEA3752372_03279 | Not Available | Positive | 3308244 - 3308462 | 8095.71 |
| putative lysine-n-methylase | SAMEA3752372_03280 | Not Available | Negative | 3308492 - 3309322 | 31278.7 |
| lateral flagellar chaperone protein (flgn-like) | SAMEA3752372_03281 | Not Available | Negative | 3309450 - 3309878 | 16662.9 |
| lateral flagellar anti-sigma factor 28 protein (flgm-like) | SAMEA3752372_03282 | Not Available | Negative | 3309891 - 3310166 | 9652.18 |
| type-2 restriction enzyme ecorii (r.ecorii) (type ii restriction enzyme ecorii) (endonuclease ecorii) | SAMEA3752372_03283 | Not Available | Positive | 3310339 - 3311544 | 45169.7 |
| dna cytosine methylase | SAMEA3752372_03284 | Not Available | Negative | 3311632 - 3313056 | 54616.0 |
| flagellar basal-body p-ring formation protein | SAMEA3752372_03285 | Not Available | Negative | 3313244 - 3313981 | 26931.6 |
| flagellar basal-body rod protein flgb | SAMEA3752372_03286 | Not Available | Positive | 3314063 - 3314398 | 12429.7 |
| flagellar basal body rod protein flgc | SAMEA3752372_03287 | Not Available | Positive | 3314401 - 3314832 | 15337.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





