Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor switch protein flin | SAMEA3752372_03268 | Not Available | Negative | 3297141 - 3297512 | 13528.3 |
| lateral flagellar export/assembly protein (flim-like) | SAMEA3752372_03269 | Not Available | Negative | 3297505 - 3298356 | 31626.4 |
| putative sigma-54 specific transcriptional regulator | SAMEA3752372_03270 | Not Available | Positive | 3298728 - 3299714 | 36383.1 |
| lateral flagellar basal body component protein (flie-like) | SAMEA3752372_03271 | Not Available | Positive | 3299729 - 3300070 | 12142.5 |
| lateral flagellar m-ring protein (flif-like) | SAMEA3752372_03272 | Not Available | Positive | 3300075 - 3301721 | 59864.7 |
| lateral flagellar c-ring switch protein (flig-like) | SAMEA3752372_03273 | Not Available | Positive | 3301699 - 3302709 | 38167.0 |
| lateral flagellar export/assembly protein (flih-like) | SAMEA3752372_03274 | Not Available | Positive | 3302713 - 3303423 | 26497.4 |
| flagellar protein export atpase | SAMEA3752372_03275 | Not Available | Positive | 3303416 - 3304753 | 47863.3 |
| lateral flagellar export/assembly protein | SAMEA3752372_03276 | Not Available | Positive | 3304756 - 3305190 | 16057.4 |
| putative glycerol-3-phosphate cytidylyltransferase | SAMEA3752372_03277 | Not Available | Positive | 3305193 - 3305597 | 14807.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





