Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative integrase | SAMEA3752372_01918 | Not Available | Positive | 1890762 - 1892042 | 48356.2 |
| protein, truncated | SAMEA3752372_01919 | Not Available | Negative | 1892044 - 1892172 | 4863.84 |
| Zinc-containing alcohol dehydrogenase superfamily protein | SAMEA3752372_01920 | Not Available | Negative | 1892230 - 1893249 | 36564.3 |
| Attr | Not Available | Not Available | Positive | 1906661 - 1906672 | Not Available |
| Hypothetical protein | SAMEA3752372_02181 | Not Available | Positive | 2165037 - 2165369 | 12548.3 |
| Antitermination protein q | SAMEA3752372_02182 | Not Available | Positive | 2165383 - 2166135 | 27783.4 |
| uncharacterised protein | SAMEA3752372_02183 | Not Available | Positive | 2166338 - 2167123 | 30451.4 |
| Holin | SAMEA3752372_02184 | Not Available | Positive | 2167213 - 2167539 | 11389.1 |
| Lysin | SAMEA3752372_02185 | Not Available | Positive | 2167543 - 2168019 | 17819.2 |
| Putative rz lytic protein | SAMEA3752372_02186 | Not Available | Positive | 2168003 - 2168395 | 14474.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





