Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| icmf-like protein | SAMEA3752372_03238 | Not Available | Positive | 3264347 - 3268213 | 143352.0 |
| uncharacterized protein conserved in bacteria | SAMEA3752372_03239 | Not Available | Positive | 3268210 - 3268986 | 29811.5 |
| mannosyl-glycoprotein endo-beta-n-acetylglucosaminidase | SAMEA3752372_03240 | Not Available | Positive | 3269008 - 3269478 | 16963.0 |
| uncharacterised protein | SAMEA3752372_03241 | Not Available | Positive | 3269463 - 3269936 | 17104.6 |
| uncharacterised protein | SAMEA3752372_03242 | Not Available | Negative | 3269779 - 3270267 | 17785.5 |
| uncharacterised protein | SAMEA3752372_03243 | Not Available | Positive | 3270464 - 3271390 | 35573.4 |
| vgr-like protein | SAMEA3752372_03244 | Not Available | Positive | 3271396 - 3273609 | 80367.6 |
| uncharacterized conserved protein | SAMEA3752372_03245 | Not Available | Positive | 3273633 - 3274076 | 16385.5 |
| rhs core protein with extension | SAMEA3752372_03246 | Not Available | Positive | 3274097 - 3278200 | 153609.0 |
| ankyrin repeat containing virulence factor | SAMEA3752372_03247 | Not Available | Positive | 3278184 - 3279284 | 41774.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





