Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3752372_03228 | Not Available | Positive | 3258403 - 3258888 | 17418.8 |
| uncharacterised protein | SAMEA3752372_03229 | Not Available | Positive | 3258885 - 3259256 | 14124.9 |
| hemolysin-coregulated protein (uncharacterized) | SAMEA3752372_03230 | Not Available | Positive | 3259368 - 3259475 | 4235.97 |
| hemolysin-coregulated protein (uncharacterized) | SAMEA3752372_03231 | Not Available | Positive | 3259485 - 3259853 | 13011.5 |
| uncharacterized protein conserved in bacteria | SAMEA3752372_03232 | Not Available | Positive | 3259921 - 3260454 | 20122.1 |
| type vi secretion protein | SAMEA3752372_03233 | Not Available | Positive | 3260458 - 3261801 | 50330.6 |
| putative type vi secretion system protein | SAMEA3752372_03234 | Not Available | Positive | 3261798 - 3263114 | 48422.7 |
| uncharacterised protein | SAMEA3752372_03235 | Not Available | Positive | 3263206 - 3263574 | 13754.3 |
| uncharacterised protein | SAMEA3752372_03236 | Not Available | Positive | 3263576 - 3264019 | 16502.7 |
| uncharacterised protein | SAMEA3752372_03237 | Not Available | Positive | 3264245 - 3264340 | 3919.74 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





