Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sufi protein | SAMEA3752372_03218 | Not Available | Positive | 3246948 - 3248360 | 51834.1 |
| radical sam superfamily protein | SAMEA3752372_03219 | Not Available | Positive | 3248471 - 3250690 | 83542.6 |
| putative lipoprotein | SAMEA3752372_03220 | Not Available | Negative | 3250733 - 3250990 | 9499.55 |
| lumazine-binding domain | SAMEA3752372_03221 | Not Available | Negative | 3251041 - 3251694 | 24941.2 |
| is2 insertion element transposase insab' | SAMEA3752372_03222 | Not Available | Positive | 3252043 - 3252699 | 24663.2 |
| chaperone clpb | SAMEA3752372_03223 | Not Available | Positive | 3252684 - 3255335 | 96770.3 |
| uncharacterised protein | SAMEA3752372_03224 | Not Available | Positive | 3255348 - 3255911 | 20119.8 |
| uncharacterised protein | SAMEA3752372_03225 | Not Available | Positive | 3255914 - 3256204 | 11240.6 |
| putative type vi secretion protein | SAMEA3752372_03226 | Not Available | Positive | 3256266 - 3256811 | 19895.9 |
| putative type vi secretion protein | SAMEA3752372_03227 | Not Available | Positive | 3256836 - 3258350 | 56705.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





