Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative monooxygenase | SAMEA3752372_03208 | Not Available | Negative | 3237044 - 3237358 | 11533.1 |
| modulator of drug activity b | SAMEA3752372_03209 | Not Available | Negative | 3237389 - 3237970 | 21920.1 |
| inner membrane protein | SAMEA3752372_03210 | Not Available | Positive | 3238328 - 3238660 | 13324.8 |
| two-component system sensor kinase | SAMEA3752372_03211 | Not Available | Negative | 3238706 - 3240055 | 50240.6 |
| two-component system response regulator | SAMEA3752372_03212 | Not Available | Negative | 3240052 - 3240711 | 24719.2 |
| protein ygiw | SAMEA3752372_03213 | Not Available | Positive | 3240863 - 3241255 | 14011.5 |
| putative regulatory protein | SAMEA3752372_03214 | Not Available | Positive | 3241308 - 3241790 | 17832.2 |
| binding protein | SAMEA3752372_03215 | Not Available | Positive | 3241899 - 3243506 | 60696.1 |
| topoisomerase iv subunit a | SAMEA3752372_03216 | Not Available | Positive | 3243644 - 3245902 | 83838.4 |
| 1-acylglycerol-3-phosphate o-acyltransferase | SAMEA3752372_03217 | Not Available | Positive | 3246136 - 3246873 | 27410.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





