Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multifunctional cca protein | SAMEA3752372_03176 | Not Available | Negative | 3203399 - 3204637 | 46511.8 |
| signal transduction protein | SAMEA3752372_03177 | Not Available | Negative | 3204701 - 3205321 | 23077.7 |
| putative adenylate cyclase | SAMEA3752372_03178 | Not Available | Positive | 3205563 - 3206864 | 48550.8 |
| bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase | SAMEA3752372_03179 | Not Available | Positive | 3206887 - 3209727 | 108410.0 |
| bifunctional protein hlde | SAMEA3752372_03180 | Not Available | Positive | 3209775 - 3211208 | 51053.6 |
| inner membrane protein yqik | SAMEA3752372_03182 | Not Available | Negative | 3211626 - 3213287 | 60593.0 |
| membrane protein yqij | SAMEA3752372_03183 | Not Available | Negative | 3213314 - 3213943 | 23123.6 |
| glycogen synthesis protein glgs | SAMEA3752372_03184 | Not Available | Positive | 3214212 - 3214412 | 7922.34 |
| yqic protein | SAMEA3752372_03185 | Not Available | Negative | 3214447 - 3214746 | 11415.8 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | SAMEA3752372_03187 | Not Available | Positive | 3215120 - 3215773 | 23354.9 |
Pathways
943 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





