Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | SAMEA3752372_03166 | Not Available | Negative | 3194485 - 3196230 | 65568.5 |
| 30s ribosomal protein s21 | SAMEA3752372_03167 | Not Available | Negative | 3196341 - 3196556 | 8500.42 |
| o-sialoglycoprotein endopeptidase | SAMEA3752372_03168 | Not Available | Positive | 3196794 - 3197807 | 36010.5 |
| putative tartrate carrier protein | SAMEA3752372_03169 | Not Available | Negative | 3197850 - 3199187 | 48242.8 |
| l-tartrate dehydratase subunit beta | SAMEA3752372_03170 | Not Available | Negative | 3199362 - 3200081 | 27038.1 |
| l(+)-tartrate dehydratase subunit alpha | SAMEA3752372_03171 | Not Available | Negative | 3200054 - 3200164 | 4205.14 |
| transcriptional activator ttdr | SAMEA3752372_03172 | Not Available | Positive | 3200371 - 3201303 | 35344.7 |
| glycerol-3-phosphate acyltransferase plsy | SAMEA3752372_03173 | Not Available | Negative | 3201316 - 3201933 | 22194.7 |
| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase | SAMEA3752372_03174 | Not Available | Positive | 3202038 - 3202406 | 13619.3 |
| undecaprenyl pyrophosphate phosphatase | SAMEA3752372_03175 | Not Available | Positive | 3202497 - 3203318 | 29790.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





