Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-anchored ribosome-binding protein | SAMEA3752372_03123 | Not Available | Negative | 3148408 - 3148713 | 11052.1 |
| protein yqjc precursor | SAMEA3752372_03124 | Not Available | Negative | 3148751 - 3149119 | 13936.5 |
| envz/ompr regulon moderator | SAMEA3752372_03125 | Not Available | Negative | 3149266 - 3149649 | 14173.0 |
| deda family membrane protein | SAMEA3752372_03126 | Not Available | Negative | 3149653 - 3150315 | 24587.0 |
| dna-binding transcriptional repressor exur | SAMEA3752372_03127 | Not Available | Negative | 3150660 - 3151436 | 29821.3 |
| hexuronate transporter | SAMEA3752372_03128 | Not Available | Negative | 3151566 - 3152864 | 46895.0 |
| glucuronate isomerase | SAMEA3752372_03129 | Not Available | Positive | 3153347 - 3154759 | 54059.3 |
| altronate hydrolase | SAMEA3752372_03130 | Not Available | Positive | 3154774 - 3156261 | 54069.1 |
| inner membrane protein | SAMEA3752372_03131 | Not Available | Positive | 3156344 - 3156895 | 20566.7 |
| putative transport protein | SAMEA3752372_03132 | Not Available | Negative | 3156900 - 3158144 | 43494.4 |
Pathways
869 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





