Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose transport system permease xylh | SAMEA3752372_03113 | Not Available | Positive | 3138200 - 3139381 | 41091.5 |
| dna-binding transcriptional activator | SAMEA3752372_03114 | Not Available | Positive | 3139459 - 3140637 | 44871.7 |
| putative endo-beta-n-acetylglucosaminidase | SAMEA3752372_03115 | Not Available | Negative | 3140745 - 3141569 | 30869.3 |
| alpha-amylase | SAMEA3752372_03116 | Not Available | Positive | 3141890 - 3143920 | 75831.7 |
| class i and ii aminotransferase | SAMEA3752372_03117 | Not Available | Positive | 3144098 - 3145351 | 46699.9 |
| transposase | SAMEA3752372_03118 | Not Available | Negative | 3145473 - 3145946 | 18239.7 |
| putative glutathione s-transferase | SAMEA3752372_03119 | Not Available | Negative | 3146077 - 3147063 | 37492.2 |
| doxx family protein | SAMEA3752372_03120 | Not Available | Negative | 3147133 - 3147615 | 17228.6 |
| cell division mukb-like protein | SAMEA3752372_03121 | Not Available | Negative | 3147712 - 3148011 | 11795.4 |
| inner membrane protein | SAMEA3752372_03122 | Not Available | Negative | 3148001 - 3148405 | 15148.0 |
Pathways
1323 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





