Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine-trna synthetase, beta subunit | SAMEA3752372_03103 | Not Available | Negative | 3126801 - 3128870 | 76829.2 |
| glycine trna synthetase | SAMEA3752372_03104 | Not Available | Negative | 3128880 - 3129791 | 34718.2 |
| putative lipoprotein | SAMEA3752372_03105 | Not Available | Negative | 3129886 - 3130194 | 11622.3 |
| putative membrane-associated acyltransferase | SAMEA3752372_03106 | Not Available | Positive | 3130369 - 3131364 | 37622.2 |
| inner membrane protein yiaa | SAMEA3752372_03107 | Not Available | Negative | 3131406 - 3131843 | 16123.6 |
| inner membrane protein | SAMEA3752372_03108 | Not Available | Negative | 3131888 - 3132229 | 12539.0 |
| xylulose kinase | SAMEA3752372_03109 | Not Available | Negative | 3132397 - 3133851 | 52668.3 |
| d-xylose isomerase | SAMEA3752372_03110 | Not Available | Negative | 3133923 - 3135245 | 49702.6 |
| d-xylose transporter subunit xylf | SAMEA3752372_03111 | Not Available | Positive | 3135611 - 3136603 | 35736.1 |
| d-xylose transport atp-binding protein xylg | SAMEA3752372_03112 | Not Available | Positive | 3136681 - 3138222 | 56390.8 |
Pathways
842 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





