Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic trehalase | SAMEA3752372_03059 | Not Available | Positive | 3075339 - 3076988 | 63682.0 |
| transcriptional regulator | SAMEA3752372_03060 | Not Available | Negative | 3077039 - 3077641 | 22545.5 |
| lysr family transcriptional regulator | SAMEA3752372_03061 | Not Available | Positive | 3078090 - 3079061 | 36108.1 |
| pp_02896 | SAMEA3752372_03062 | Not Available | Positive | 3079110 - 3080123 | Not Available |
| major facilitator superfamily protein | SAMEA3752372_03063 | Not Available | Positive | 3080515 - 3081837 | 47210.9 |
| putative outer membrane assembly protein | SAMEA3752372_03064 | Not Available | Negative | 3082010 - 3084070 | 74463.8 |
| diguanylate phosphodiesterase | SAMEA3752372_03065 | Not Available | Negative | 3084140 - 3084907 | 29635.0 |
| ketodeoxygluconokinase | SAMEA3752372_03066 | Not Available | Positive | 3085139 - 3086068 | 33963.2 |
| putative protease | SAMEA3752372_03067 | Not Available | Negative | 3086164 - 3087660 | 55519.4 |
| c4-dicarboxylate transport protein | SAMEA3752372_03068 | Not Available | Negative | 3087880 - 3089166 | 45439.2 |
Pathways
501 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





