Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | SAMEA3752372_02956 | Not Available | Negative | 2979505 - 2979954 | 15770.0 |
| 30s ribosomal protein s18 | SAMEA3752372_02957 | Not Available | Negative | 2979996 - 2980223 | 8986.94 |
| primosomal replication protein n | SAMEA3752372_02958 | Not Available | Negative | 2980228 - 2980542 | 11472.9 |
| 30s ribosomal protein s6 | SAMEA3752372_02959 | Not Available | Negative | 2980549 - 2980944 | 15187.9 |
| protein | SAMEA3752372_02960 | Not Available | Positive | 2981271 - 2981546 | 10149.9 |
| l-ribulose-5-phosphate 4-epimerase ulaf | SAMEA3752372_02961 | Not Available | Negative | 2981675 - 2982361 | 25337.2 |
| l-xylulose 5-phosphate 3-epimerase | SAMEA3752372_02962 | Not Available | Negative | 2982361 - 2983215 | 32054.5 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | SAMEA3752372_02963 | Not Available | Negative | 2983225 - 2983875 | 23650.4 |
| ascorbate-specific pts system eiia component | SAMEA3752372_02964 | Not Available | Negative | 2983889 - 2984353 | 17212.5 |
| pts system l-ascorbate-specific transporter subunit iib | SAMEA3752372_02965 | Not Available | Negative | 2984363 - 2984668 | 10838.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





