Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha helix protein | SAMEA3752372_02925 | Not Available | Positive | 2946555 - 2947106 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | SAMEA3752372_02926 | Not Available | Negative | 2947189 - 2948562 | 49882.0 |
| fructose-1,6-bisphosphatase | SAMEA3752372_02927 | Not Available | Positive | 2948738 - 2949736 | 36836.0 |
| abc transporter permease | SAMEA3752372_02928 | Not Available | Negative | 2949769 - 2950764 | 35028.0 |
| abc transporter permease | SAMEA3752372_02929 | Not Available | Negative | 2950751 - 2951773 | 35541.1 |
| sugar transport system atp-binding protein | SAMEA3752372_02930 | Not Available | Negative | 2951787 - 2953340 | 57171.8 |
| abc transporter substrate-binding protein | SAMEA3752372_02931 | Not Available | Negative | 2953422 - 2954378 | 34310.5 |
| inorganic pyrophosphatase | SAMEA3752372_02932 | Not Available | Positive | 2954688 - 2955218 | 19704.6 |
| toxin chpb | SAMEA3752372_02933 | Not Available | Negative | 2955297 - 2955611 | 11065.5 |
| antitoxin chps | SAMEA3752372_02934 | Not Available | Negative | 2955641 - 2955892 | 9332.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





