Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mg(2+) transport atpase, p-type | SAMEA3752372_02914 | Not Available | Negative | 2933377 - 2936073 | 99478.2 |
| trehalose operon repressor | SAMEA3752372_02916 | Not Available | Positive | 2936452 - 2937399 | 34589.9 |
| trehalose-specific pts system eiibc component | SAMEA3752372_02917 | Not Available | Positive | 2937518 - 2938939 | 51109.0 |
| trehalose-6-phosphate hydrolase | SAMEA3752372_02918 | Not Available | Positive | 2938989 - 2940644 | 63807.0 |
| anaerobic ribonucleoside-triphosphate reductase | SAMEA3752372_02919 | Not Available | Positive | 2941038 - 2943176 | 80043.0 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | SAMEA3752372_02920 | Not Available | Positive | 2943361 - 2943825 | 17430.9 |
| addiction module toxin rele | SAMEA3752372_02921 | Not Available | Negative | 2943826 - 2944116 | 11367.8 |
| bifunctional antitoxin/transcriptional repressor relb | SAMEA3752372_02922 | Not Available | Negative | 2944106 - 2944348 | 9126.09 |
| soluble cytochrome b562 | SAMEA3752372_02923 | Not Available | Negative | 2944540 - 2944926 | 13989.7 |
| putative modulator of dna gyrase | SAMEA3752372_02924 | Not Available | Negative | 2945109 - 2946461 | 48372.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





