Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrabc system protein b (excinuclease abc subunit b) | SAMEA3752372_02904 | Not Available | Negative | 2922288 - 2924309 | 76230.6 |
| dithiobiotin synthetase | SAMEA3752372_02905 | Not Available | Negative | 2924888 - 2925565 | 24112.9 |
| biotin biosynthesis protein bioc | SAMEA3752372_02906 | Not Available | Negative | 2925558 - 2926313 | 28172.7 |
| 8-amino-7-oxononanoate synthase | SAMEA3752372_02907 | Not Available | Negative | 2926300 - 2927454 | 41633.7 |
| biotin synthetase | SAMEA3752372_02908 | Not Available | Negative | 2927451 - 2928491 | 38650.3 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMEA3752372_02909 | Not Available | Positive | 2928578 - 2929867 | 47185.1 |
| putative phosphatidylethanolamine-binding protein | SAMEA3752372_02910 | Not Available | Positive | 2929926 - 2930402 | 17100.1 |
| acyl-coa thioester hydrolase | SAMEA3752372_02911 | Not Available | Positive | 2930554 - 2931837 | 46010.6 |
| transposase | SAMEA3752372_02912 | Not Available | Negative | 2931902 - 2932504 | 23213.8 |
| transposase | SAMEA3752372_02913 | Not Available | Negative | 2932729 - 2933250 | 20054.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





