Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Type ii toxin-antitoxin system toxin rata | SAMEA3752372_01594 | Not Available | Negative | 1587812 - 1588288 | 17727.7 |
| Attr | Not Available | Not Available | Positive | 1588408 - 1588419 | Not Available |
| Ssra-binding protein | SAMEA3752372_01595 | Not Available | Positive | 1588420 - 1588902 | 18270.1 |
| Tmrna,resume; | Not Available | Not Available | Positive | 1589117 - 1589479 | Not Available |
| Cp4-57 prophage | SAMEA3752372_01597 | Not Available | Positive | 1589664 - 1590872 | 45346.4 |
| uncharacterised protein | SAMEA3752372_01598 | Not Available | Positive | 1590914 - 1591276 | 13249.1 |
| uncharacterised protein | SAMEA3752372_01599 | Not Available | Positive | 1591263 - 1591844 | 22295.7 |
| uncharacterised protein | SAMEA3752372_01600 | Not Available | Positive | 1591844 - 1592335 | 19398.5 |
| virulence factor | SAMEA3752372_01601 | Not Available | Positive | 1592328 - 1594247 | 74022.6 |
| Amber mutation-suppressing protein | SAMEA3752372_01602 | Not Available | Negative | 1594614 - 1595186 | 21339.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





