Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thii | SAMEA3752372_02717 | Not Available | Negative | 2738674 - 2740122 | 54976.3 |
| exodeoxyribonuclease 7 small subunit | SAMEA3752372_02718 | Not Available | Positive | 2740328 - 2740570 | 8952.42 |
| geranyltranstransferase | SAMEA3752372_02719 | Not Available | Positive | 2740570 - 2741469 | 32161.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMEA3752372_02720 | Not Available | Positive | 2741494 - 2743356 | 67592.9 |
| putative aldo/keto reductase | SAMEA3752372_02721 | Not Available | Positive | 2743614 - 2744588 | 36422.2 |
| non-lee-encoded type iii effector | SAMEA3752372_02722 | Not Available | Positive | 2744808 - 2746379 | 60691.8 |
| phosphatidylglycerophosphatase a | SAMEA3752372_02723 | Not Available | Negative | 2746556 - 2747071 | 19332.2 |
| thiamine-monophosphate kinase | SAMEA3752372_02724 | Not Available | Negative | 2747049 - 2748026 | 35084.9 |
| n utilization substance protein b | SAMEA3752372_02725 | Not Available | Negative | 2748104 - 2748523 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMEA3752372_02726 | Not Available | Negative | 2748543 - 2749013 | 16206.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





