Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna-processing protein rimm | SAMEA3752372_01584 | Not Available | Negative | 1578894 - 1579442 | 20606.6 |
| 30s ribosomal protein s16 | SAMEA3752372_01585 | Not Available | Negative | 1579461 - 1579709 | 9191.08 |
| Signal recognition particle protein | SAMEA3752372_01586 | Not Available | Negative | 1579958 - 1581319 | 49790.5 |
| Inner membrane protein ypjd | SAMEA3752372_01587 | Not Available | Positive | 1581411 - 1582277 | 32131.5 |
| Hlyc/corc family transporter | SAMEA3752372_01588 | Not Available | Positive | 1582343 - 1583584 | 46353.9 |
| Heat shock protein | SAMEA3752372_01589 | Not Available | Negative | 1583639 - 1584232 | 21813.1 |
| Dna repair protein recn | SAMEA3752372_01590 | Not Available | Positive | 1584355 - 1585233 | 32568.3 |
| Dna repair protein recn | SAMEA3752372_01591 | Not Available | Positive | 1585319 - 1586980 | 61392.1 |
| Outer membrane protein assembly factor bame | SAMEA3752372_01592 | Not Available | Positive | 1587129 - 1587470 | 12302.8 |
| Rnfh family protein | SAMEA3752372_01593 | Not Available | Negative | 1587532 - 1587822 | 10761.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





