Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator rcsb | SAMEA3752372_02489 | Not Available | Negative | 2501623 - 2502273 | 23672.0 |
| two-component system sensor kinase | SAMEA3752372_02490 | Not Available | Negative | 2502290 - 2504962 | 100381.0 |
| outer membrane porin protein c | SAMEA3752372_02492 | Not Available | Positive | 2505701 - 2506828 | 41275.4 |
| thiamine biosynthesis lipoprotein | SAMEA3752372_02493 | Not Available | Positive | 2506940 - 2507995 | 38565.9 |
| regulatory protein of adaptative response | SAMEA3752372_02494 | Not Available | Positive | 2508069 - 2509133 | 39364.1 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | SAMEA3752372_02495 | Not Available | Positive | 2509133 - 2509783 | 23991.7 |
| abc transporter atpase/permease | SAMEA3752372_02496 | Not Available | Positive | 2509859 - 2511502 | 61598.4 |
| malate:quinone oxidoreductase | SAMEA3752372_02497 | Not Available | Positive | 2511720 - 2513366 | 60248.1 |
| ecotin | SAMEA3752372_02498 | Not Available | Negative | 2513516 - 2514004 | 18179.1 |
| uncharacterised protein | SAMEA3752372_02499 | Not Available | Negative | 2514139 - 2514303 | 6183.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





