Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0353 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1469868 bp
Thymine Count
1472956 bp
Guanine Count
1488838 bp
Cytosine Count
1489051 bp
Genome Length
5920936 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
676 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3752372_02034 | Not Available | Positive | 2008167 - 2009279 | 39833.7 |
| ydil protein | SAMEA3752372_02036 | Not Available | Positive | 2009708 - 2010064 | 13961.6 |
| major facilitator superfamily protein | SAMEA3752372_02037 | Not Available | Positive | 2010164 - 2011378 | 44576.6 |
| major facilitator superfamily protein | SAMEA3752372_02038 | Not Available | Positive | 2011605 - 2012870 | 46078.0 |
| quinate/shikimate dehydrogenase | SAMEA3752372_02039 | Not Available | Positive | 2012882 - 2013748 | 31229.6 |
| 3-dehydroquinate dehydratase | SAMEA3752372_02040 | Not Available | Positive | 2013779 - 2014537 | 27468.2 |
| putative coa transferase | SAMEA3752372_02041 | Not Available | Positive | 2014682 - 2016277 | 57565.7 |
| putative acyl-coa dehydrogenase | SAMEA3752372_02042 | Not Available | Positive | 2016291 - 2017442 | 43005.5 |
| uncharacterised protein | SAMEA3752372_02043 | Not Available | Positive | 2018089 - 2018889 | 29777.1 |
| uncharacterised protein | SAMEA3752372_02044 | Not Available | Positive | 2018905 - 2019783 | 32775.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





